Research Publications

» JULIE Lab » Staff » Ekaterina Buyko » Research

Research

Research Interests

• Text Mining in Biomedicine
• Event Extraction
  
• Relation Extraction
• Coordination Resolution
• UIMA (Unstructured Information Management Architecture)
  
• Design of Annotation Schemata

Projects Involved

• CALBC EU Project (http://www.calbc.eu/)
  
• EU Strep Project "BOOTStrep" (http://www.bootstrep.org )
  
• BMBF e-science Project "StemNet" (http://www.stemnet.de )
• EU Network of Excellence "Semantic Mining in Biomedicine" (http://www.semanticmining.org )

Challenges

• second rank at the "Shared Task for Event Extraction @BioNLP 2009",  JULIELab team

Organization of Workshops and Tutorials

• co-organization of the workshop "UIMA for NLP" @LREC 2008
• tutorial "UIMA for Semantic Text Mining in Biomedicine" @SMBM 2008
• co-organization of the workshop "New Challenges for NLP Frameworks" @LREC 2010
  

Reviewing Activities

• member in PC of the workshop "UIMA for NLP" @LREC 2008
• member in PC of the JCNLP 2008
• member in PC of the workshop "New Challenges for NLP Frameworks" @LREC 2010
• member in PC of the CONLL 2010 Shared Task
• reviewer for BMC Bioinformatics
  

Teaching Experience

• Java Programming
• Introduction to Computational Linguistics